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Convolutional Neural Networks for the evaluation of cancer in Barrett's esophagus: Explainable AI to lighten up the black-box

dc.contributor.authorde Souza, Luis A.
dc.contributor.authorMendel, Robert
dc.contributor.authorStrasser, Sophia
dc.contributor.authorEbigbo, Alanna
dc.contributor.authorProbst, Andreas
dc.contributor.authorMessmann, Helmut
dc.contributor.authorPapa, João P. [UNESP]
dc.contributor.authorPalm, Christoph
dc.contributor.institutionUniversidade Federal de São Carlos (UFSCar)
dc.contributor.institutionOstbayerische Technische Hochschule Regensburg (OTH Regensburg)
dc.contributor.institutionUniversitätsklinikum Augsburg
dc.contributor.institutionUniversidade Estadual Paulista (UNESP)
dc.contributor.institutionRegensburg Center of Health Sciences and Technology (RCHST)
dc.date.accessioned2022-05-01T05:29:29Z
dc.date.available2022-05-01T05:29:29Z
dc.date.issued2021-08-01
dc.description.abstractEven though artificial intelligence and machine learning have demonstrated remarkable performances in medical image computing, their level of accountability and transparency must be provided in such evaluations. The reliability related to machine learning predictions must be explained and interpreted, especially if diagnosis support is addressed. For this task, the black-box nature of deep learning techniques must be lightened up to transfer its promising results into clinical practice. Hence, we aim to investigate the use of explainable artificial intelligence techniques to quantitatively highlight discriminative regions during the classification of early-cancerous tissues in Barrett's esophagus-diagnosed patients. Four Convolutional Neural Network models (AlexNet, SqueezeNet, ResNet50, and VGG16) were analyzed using five different interpretation techniques (saliency, guided backpropagation, integrated gradients, input × gradients, and DeepLIFT) to compare their agreement with experts' previous annotations of cancerous tissue. We could show that saliency attributes match best with the manual experts' delineations. Moreover, there is moderate to high correlation between the sensitivity of a model and the human-and-computer agreement. The results also lightened that the higher the model's sensitivity, the stronger the correlation of human and computational segmentation agreement. We observed a relevant relation between computational learning and experts' insights, demonstrating how human knowledge may influence the correct computational learning.en
dc.description.affiliationDepartment of Computing São Carlos Federal University - UFSCar
dc.description.affiliationRegensburg Medical Image Computing (ReMIC) Ostbayerische Technische Hochschule Regensburg (OTH Regensburg)
dc.description.affiliationMedizinische Klinik III Universitätsklinikum Augsburg
dc.description.affiliationDepartment of Computing São Paulo State University UNESP
dc.description.affiliationRegensburg Center of Health Sciences and Technology (RCHST)
dc.description.affiliationUnespDepartment of Computing São Paulo State University UNESP
dc.description.sponsorshipFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
dc.description.sponsorshipConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
dc.description.sponsorshipIdFAPESP: 2013/07375–0
dc.description.sponsorshipIdFAPESP: 2014/12236–1
dc.description.sponsorshipIdFAPESP: 2016/19403–6
dc.description.sponsorshipIdFAPESP: 2017/04847–9
dc.description.sponsorshipIdFAPESP: 2019/08605–5
dc.description.sponsorshipIdCNPq: 306166/2014–3
dc.description.sponsorshipIdCNPq: 307066/2017–7
dc.identifierhttp://dx.doi.org/10.1016/j.compbiomed.2021.104578
dc.identifier.citationComputers in Biology and Medicine, v. 135.
dc.identifier.doi10.1016/j.compbiomed.2021.104578
dc.identifier.issn1879-0534
dc.identifier.issn0010-4825
dc.identifier.scopus2-s2.0-85108339354
dc.identifier.urihttp://hdl.handle.net/11449/233177
dc.language.isoeng
dc.relation.ispartofComputers in Biology and Medicine
dc.sourceScopus
dc.subjectAdenocarcinoma
dc.subjectBarrett's esophagus
dc.subjectComputer-aided diagnosis
dc.subjectExplainable artificial intelligence
dc.subjectMachine learning
dc.titleConvolutional Neural Networks for the evaluation of cancer in Barrett's esophagus: Explainable AI to lighten up the black-boxen
dc.typeArtigopt
dspace.entity.typePublication
relation.isDepartmentOfPublication872c0bbb-bf84-404e-9ca7-f87a0fe94e58
relation.isDepartmentOfPublication.latestForDiscovery872c0bbb-bf84-404e-9ca7-f87a0fe94e58
relation.isOrgUnitOfPublicationaef1f5df-a00f-45f4-b366-6926b097829b
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unesp.author.orcid0000-0002-6494-7514[7]
unesp.campusUniversidade Estadual Paulista (UNESP), Faculdade de Ciências, Baurupt
unesp.departmentComputação - FCpt

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