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Evaluation of sparsity metrics and evolutionary algorithms applied for normalization of H&E histological images

dc.contributor.authorTosta, Thaína A. Azevedo
dc.contributor.authorde Faria, Paulo Rogério
dc.contributor.authorNeves, Leandro Alves [UNESP]
dc.contributor.authorMartins, Alessandro Santana
dc.contributor.authorKaushal, Chetna
dc.contributor.authordo Nascimento, Marcelo Zanchetta
dc.contributor.institutionUniversidade de São Paulo (USP)
dc.contributor.institutionUniversidade Federal de Uberlândia (UFU)
dc.contributor.institutionUniversidade Estadual Paulista (UNESP)
dc.contributor.institutionFederal Institute of Triângulo Mineiro
dc.contributor.institutionChitkara University
dc.date.accessioned2025-04-29T18:43:19Z
dc.date.issued2024-03-01
dc.description.abstractColor variations in H&E histological images can impact the segmentation and classification stages of computational systems used for cancer diagnosis. To address these variations, normalization techniques can be applied to adjust the colors of histological images. Estimates of stain color appearance matrices and stain density maps can be employed to carry out these color adjustments. This study explores these estimates by leveraging a significant biological characteristic of stain mixtures, which is represented by a sparsity parameter. Computationally estimating this parameter can be accomplished through various sparsity measures and evolutionary algorithms. Therefore, this study aimed to evaluate the effectiveness of different sparsity measures and algorithms for color normalization of H&E-stained histological images. The results obtained demonstrated that the choice of different sparsity measures significantly impacts the outcomes of normalization. The sparsity metric lϵ0 proved to be the most suitable for it. Conversely, the evolutionary algorithms showed little variations in the conducted quantitative analyses. Regarding the selection of the best evolutionary algorithm, the results indicated that particle swarm optimization with a population size of 250 individuals is the most appropriate choice.en
dc.description.affiliationInstitute of Science and Technology Federal University of São Paulo, Av. Cesare Mansueto Giulio Lattes, 1201, São José dos Campos
dc.description.affiliationDepartment of Histology and Morphology Institute of Biomedical Science Federal University of Uberlândia, Av. Amazonas, S/N, Minas Gerais
dc.description.affiliationDepartment of Computer Science and Statistics São Paulo State University, R. Cristóvão Colombo, 2265, São José do Rio Preto
dc.description.affiliationFederal Institute of Triângulo Mineiro, R. Belarmino Vilela Junqueira S/N, Minas Gerais
dc.description.affiliationChitkara University Institute of Engineering and Technology Chitkara University, Punjab
dc.description.affiliationFaculty of Computer Science Federal University of Uberlândia, Av. João Naves de Ávila, 2121, Minas Gerais
dc.description.affiliationUnespDepartment of Computer Science and Statistics São Paulo State University, R. Cristóvão Colombo, 2265, São José do Rio Preto
dc.description.sponsorshipCoordenação de Aperfeiçoamento de Pessoal de Nível Superior (CAPES)
dc.description.sponsorshipFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
dc.description.sponsorshipConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
dc.description.sponsorshipFundação de Amparo à Pesquisa do Estado de Minas Gerais (FAPEMIG)
dc.description.sponsorshipIdCAPES: 1575210
dc.description.sponsorshipIdFAPESP: 2022/03020-1
dc.description.sponsorshipIdCNPq: 311404/2021-9
dc.description.sponsorshipIdCNPq: 313643/2021-0
dc.description.sponsorshipIdFAPEMIG: APQ-00578-18
dc.description.sponsorshipIdFAPEMIG: APQ-01129-21
dc.identifierhttp://dx.doi.org/10.1007/s10044-024-01218-7
dc.identifier.citationPattern Analysis and Applications, v. 27, n. 1, 2024.
dc.identifier.doi10.1007/s10044-024-01218-7
dc.identifier.issn1433-755X
dc.identifier.issn1433-7541
dc.identifier.scopus2-s2.0-85186613180
dc.identifier.urihttps://hdl.handle.net/11449/299740
dc.language.isoeng
dc.relation.ispartofPattern Analysis and Applications
dc.sourceScopus
dc.subjectEvolutionary algorithms
dc.subjectH&E color normalization
dc.subjectHistopathology image analysis
dc.subjectSparse nonnegative matrix factorization
dc.subjectSparsity estimation
dc.titleEvaluation of sparsity metrics and evolutionary algorithms applied for normalization of H&E histological imagesen
dc.typeArtigopt
dspace.entity.typePublication
unesp.author.orcid0000-0002-9291-8892[1]
unesp.campusUniversidade Estadual Paulista (UNESP), Instituto de Biociências, Letras e Ciências Exatas, São José do Rio Pretopt

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