GALANT: a Cytoscape plugin for visualizing data as functional landscapes projected onto biological networks
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Data
2013-10-01
Autores
Camilo, Esther [UNESP]
Bovolenta, Luiz A. [UNESP]
Acencio, Marcio L. [UNESP]
Rybarczyk-Filho, Jose L. [UNESP]
Castro, Mauro A. A.
Moreira, Jose C. F.
Lemke, Ney [UNESP]
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Oxford University Press
Resumo
Network-level visualization of functional data is a key aspect of both analysis and understanding of biological systems. In a continuing effort to create clear and integrated visualizations that facilitate the gathering of novel biological insights despite the overwhelming complexity of data, we present here the GrAph LANdscape VisualizaTion (GALANT), a Cytoscape plugin that builds functional landscapes onto biological networks. By using GALANT, it is possible to project any type of numerical data onto a network to create a smoothed data map resembling the network layout. As a Cytoscape plugin, GALANT is further improved by the functionalities of Cytoscape, the popular bioinformatics package for biological network visualization and data integration.
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Bioinformatics. Oxford: Oxford Univ Press, v. 29, n. 19, p. 2505-2506, 2013.