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Modeling a spatially restricted distribution in the Neotropics: How the size of calibration area affects the performance of five presence-only methods

dc.contributor.authorGiovanelli, Joao G. R. [UNESP]
dc.contributor.authorde Siqueira, Marinez Ferreira
dc.contributor.authorHaddad, Celio Fernando Baptista [UNESP]
dc.contributor.authorAlexandrino, Joao [UNESP]
dc.contributor.institutionUniversidade Estadual Paulista (Unesp)
dc.contributor.institutionInst Pesquisas Jardim Bot Rio de Janeiro
dc.date.accessioned2014-05-20T14:00:00Z
dc.date.available2014-05-20T14:00:00Z
dc.date.issued2010-01-24
dc.description.abstractWe here examine species distribution models for a Neotropical anuran restricted to ombrophilous areas in the Brazilian Atlantic Forest hotspot. We extend the known occurrence for the treefrog Hypsiboas bischoffi (Anura: Hylidae) through GPS field surveys and use five modeling methods (BIOCLIM, DOMAIN, OM-GARP, SVM, and MAXENT) and selected bioclimatic and topographic variables to model the species distribution. Models were first trained using two calibration areas: the Brazilian Atlantic Forest (BAF) and the whole of South America (SA). All modeling methods showed good levels of predictive power and accuracy with mean AUC ranging from 0.77 (BIOCLIM/BAF) to 0.99 (MAXENT/SA). MAXENT and SVM were the most accurate presence-only methods among those tested here. All but the SVM models calibrated with SA predicted larger distribution areas when compared to models calibrated in BAF. OM-GARP dramatically overpredicted the species distribution for the model calibrated in SA, with a predicted area around 10(6) km(2) larger than predicted by other SDMs. With increased calibration area (and environmental space), OM-GARP predictions followed changes in the environmental space associated with the increased calibration area, while MAXENT models were more consistent across calibration areas. MAXENT was the only method that retrieved consistent predictions across calibration areas, while allowing for some overprediction, a result that may be relevant for modeling the distribution of other spatially restricted organisms. (C) 2009 Elsevier B.V. All rights reserved.en
dc.description.affiliationUniv Estadual Paulista UNESP, Inst Biociencias, Dept Zool, BR-13506970 Rio Claro, SP, Brazil
dc.description.affiliationUniv Estadual Paulista UNESP, Inst Biociencias, Grad Program Zool, BR-13506970 Rio Claro, SP, Brazil
dc.description.affiliationInst Pesquisas Jardim Bot Rio de Janeiro, Rio de Janeiro, Brazil
dc.description.affiliationUnespUniv Estadual Paulista UNESP, Inst Biociencias, Dept Zool, BR-13506970 Rio Claro, SP, Brazil
dc.description.affiliationUnespUniv Estadual Paulista UNESP, Inst Biociencias, Grad Program Zool, BR-13506970 Rio Claro, SP, Brazil
dc.description.sponsorshipNatureServe
dc.description.sponsorshipConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
dc.description.sponsorshipFundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP)
dc.description.sponsorshipIdCNPq: 130315/2007-9
dc.description.sponsorshipIdFAPESP: 05/152727-5
dc.format.extent215-224
dc.identifierhttp://dx.doi.org/10.1016/j.ecolmodel.2009.10.009
dc.identifier.citationEcological Modelling. Amsterdam: Elsevier B.V., v. 221, n. 2, p. 215-224, 2010.
dc.identifier.doi10.1016/j.ecolmodel.2009.10.009
dc.identifier.issn0304-3800
dc.identifier.lattes0458077399058762
dc.identifier.urihttp://hdl.handle.net/11449/21217
dc.identifier.wosWOS:000273628800010
dc.language.isoeng
dc.publisherElsevier B.V.
dc.relation.ispartofEcological Modelling
dc.relation.ispartofjcr2.507
dc.relation.ispartofsjr1,084
dc.rights.accessRightsAcesso restrito
dc.sourceWeb of Science
dc.subjectAmphibiaen
dc.subjectBIOCLIMen
dc.subjectCalibration areaen
dc.subjectDOMAINen
dc.subjectMAXENTen
dc.subjectOM-GARPen
dc.subjectPseudoabsenceen
dc.subjectSVMen
dc.subjectMinimum presence thresholden
dc.titleModeling a spatially restricted distribution in the Neotropics: How the size of calibration area affects the performance of five presence-only methodsen
dc.typeArtigo
dcterms.licensehttp://www.elsevier.com/about/open-access/open-access-policies/article-posting-policy
dcterms.rightsHolderElsevier B.V.
dspace.entity.typePublication
unesp.author.lattes0458077399058762[3]
unesp.author.orcid0000-0003-2427-0964[4]
unesp.author.orcid0000-0002-7314-9442[1]
unesp.author.orcid0000-0002-7044-5764[3]
unesp.campusUniversidade Estadual Paulista (UNESP), Instituto de Biociências, Rio Claropt
unesp.departmentZoologia - IBpt

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