Publicação: Development of nuclear and plastid SNP markers for genetic studies of Dipteryx tree species in Amazonia
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Editor
Springer
Tipo
Artigo
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Resumo
We developed nuclear and plastid single nucleotide polymorphism (SNP) and insertion/deletion (INDEL) markers for Dipteryx species using a combination of restriction associated DNA sequencing (RADSeq) and low coverage MiSeq genome sequencing. Of the total 315 loci genotyped using a MassARRAY platform, 292 loci were variable and polymorphic among the 73 sampled individuals from French Guiana, Brasil, Peru, and Bolivia. A final set of 56 nuclear SNPs, 26 chloroplast SNPs, 2 chloroplast INDELs, and 32 mitochondrial SNPs identifying significant population structure was developed. This set of loci will be useful for studies on population genetics of Dipteryx species in Amazonia.
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Palavras-chave
Cumaru, Timber species, SNP, MassARRAY
Idioma
Inglês
Como citar
Conservation Genetics Resources. Dordrecht: Springer, v. 11, n. 3, p. 333-336, 2019.
