The mitochondrial genome of Brachycephalus brunneus (Anura: Brachycephalidae), with comments on the phylogenetic position of Brachycephalidae

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dc.contributor.authorPie, Marcio R.
dc.contributor.authorStroher, Patricia R.
dc.contributor.authorBornschein, Marcos R. [UNESP]
dc.contributor.authorRibeiro, Luiz F.
dc.contributor.authorFaircloth, Brant C.
dc.contributor.authorMcCormack, John E.
dc.contributor.institutionUniv Fed Parana
dc.contributor.institutionInst Estudos Ambientais
dc.contributor.institutionUniversidade Estadual Paulista (Unesp)
dc.contributor.institutionPontificia Univ Catolica Parana
dc.contributor.institutionLouisiana State Univ
dc.contributor.institutionOccidental Coll
dc.date.accessioned2018-11-26T15:44:12Z
dc.date.available2018-11-26T15:44:12Z
dc.date.issued2017-04-01
dc.description.abstractThe mitochondrial genome of Brachycephalus brunneus was determined by next generation sequencing of mitochondrial DNA. Without its control region, it has a total length of 15,485 bp, consisting of 37 genes: 13 protein-coding genes, 2 rRNA genes, and 22 tRNA genes. Except for eight tRNAs and the nd6 gene, all other mitochondrial genes are encoded on the heavy strand. ATG and ATC act mainly as the initial codon in 10 protein coding genes, whereas nd2 and cox1 use ATT and nad3 uses ATA. Gene order is generally consistent with that observed in closely-related families. The cloverleaf structures for trnS1 and trnC lacked the DHU-stem and DHU-loop, respectively. Phylogenetic analyses of mitogenomes of closely-related families indicate that Brachycephalidae is more closely related to Craugastoridae than to Eleutherodactylidae. This is the first sequenced mitochondrial genome for the entire Brachycephalidae and can provide the basis for the development of mitochondrial markers for other members of the family, including many species that are critically endangered. (C) 2017 Elsevier Ltd. All rights reserved.en
dc.description.affiliationUniv Fed Parana, Dept Zool, BR-81531990 Curitiba, Parana, Brazil
dc.description.affiliationInst Estudos Ambientais, Mater Nat, BR-80250020 Curitiba, Parana, Brazil
dc.description.affiliationUniv Estadual Paulista, Inst Biociencias, Praca Infante Dom Henrique S-No,Parque Bitaru, BR-11330900 Sao Paulo, Brazil
dc.description.affiliationPontificia Univ Catolica Parana, Escola Saude, BR-80215901 Curitiba, Parana, Brazil
dc.description.affiliationLouisiana State Univ, Dept Biol Sci, Baton Rouge, LA 70803 USA
dc.description.affiliationLouisiana State Univ, Museum Nat Sci, Baton Rouge, LA 70803 USA
dc.description.affiliationOccidental Coll, Moore Lab Zool, 1600 Campus Rd, Los Angeles, CA 90041 USA
dc.description.affiliationUnespUniv Estadual Paulista, Inst Biociencias, Praca Infante Dom Henrique S-No,Parque Bitaru, BR-11330900 Sao Paulo, Brazil
dc.description.sponsorshipFundacao Grupo Boticario de Protecao a Natureza
dc.description.sponsorshipConselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq)
dc.description.sponsorshipIdFundacao Grupo Boticario de Protecao a Natureza: 0895_20111
dc.description.sponsorshipIdFundacao Grupo Boticario de Protecao a Natureza: A0010_2014
dc.description.sponsorshipIdCNPq: 571334/2008-3
dc.format.extent26-31
dc.identifierhttp://dx.doi.org/10.1016/j.bse.2016.12.009
dc.identifier.citationBiochemical Systematics And Ecology. Oxford: Pergamon-elsevier Science Ltd, v. 71, p. 26-31, 2017.
dc.identifier.doi10.1016/j.bse.2016.12.009
dc.identifier.fileWOS000401046000004.pdf
dc.identifier.issn0305-1978
dc.identifier.urihttp://hdl.handle.net/11449/159539
dc.identifier.wosWOS:000401046000004
dc.language.isoeng
dc.publisherElsevier B.V.
dc.relation.ispartofBiochemical Systematics And Ecology
dc.relation.ispartofsjr0,373
dc.rights.accessRightsAcesso aberto
dc.sourceWeb of Science
dc.subjectAnuran
dc.subjectBrazil
dc.subjectTerrarana
dc.subjectAtlantic forest
dc.titleThe mitochondrial genome of Brachycephalus brunneus (Anura: Brachycephalidae), with comments on the phylogenetic position of Brachycephalidaeen
dc.typeArtigo
dcterms.licensehttp://www.elsevier.com/about/open-access/open-access-policies/article-posting-policy
dcterms.rightsHolderElsevier B.V.

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