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Fractal dimension analysis: A new tool for analyzing colony-forming units

dc.contributor.authorNai, Gisele Alborghetti
dc.contributor.authorMartelli, Cesar Alberto TALAvera
dc.contributor.authorMedina, Denis Aloísio Lopes
dc.contributor.authorOliveira, Mayla Silva Cayres de
dc.contributor.authorCaldeira, Isadora Delfino
dc.contributor.authorHenriques, Bruno Carvalho
dc.contributor.authorPortelinha, Maria Júlia Schadeck
dc.contributor.authorEller, Lizziane Kretli Winkelstroter
dc.contributor.authorMarques, Mariângela Esther Alencar [UNESP]
dc.contributor.institutionUniversidade do Oeste Paulista (UNOESTE)
dc.contributor.institutionUniversidade Estadual Paulista (Unesp)
dc.date.accessioned2021-06-25T10:49:37Z
dc.date.available2021-06-25T10:49:37Z
dc.date.issued2021-01-01
dc.description.abstractThe gold standard for quantifying bacteria both in routine diagnostics and in research is plating followed by count of colony-forming units (CFU). But, manual CFU counting on plates is time-consuming and subjective. We evaluated fractal dimension as a new methodology for evaluating CFU. Twenty fragments of expanded polytetrafluoroethylene (ePTFE) synthetic vascular prosthesis and 20 silicone prostheses were embedded in bacterial suspensions and incubated. The prostheses were then sown in solid culture medium and incubated for 48 h. Petri dishes were photographed and analyzed by fractal dimension. There was correlation between the number of CFU in manual counting and the fractal dimension analysis (p = 0.0001). We demonstrated that fractal dimension is a useful method for microbiological analyses in researches. It makes CFU analysis easier and faster and can be used regardless of the culture medium. • Petri dishes with different bacterial colonies were photographed with a digital camera under natural light. • The images were binarized and analyzed with ImageJⓇ's “fractal dimension” tool. • Fractal dimension analysis showed to be a good tool for evaluating the amount of colony-forming unit.en
dc.description.affiliationDepartment of Pathology Universidade do Oeste Paulista (UNOESTE), Rua José Bongiovani, 700
dc.description.affiliationDepartment of Surgery Universidade do Oeste Paulista (UNOESTE), Rua José Bongiovani, 700
dc.description.affiliationLaboratory of Clinical Analysis Universidade do Oeste Paulista (UNOESTE), Rua José Bongiovani, 700
dc.description.affiliationMedical College Universidade do Oeste Paulista (UNOESTE), Rua José Bongiovani, 700
dc.description.affiliationDepartment of Microbiology Graduate Program in Health Sciences Universidade do Oeste Paulista (UNOESTE), Rua José Bongiovani, 700
dc.description.affiliationDepartment of Pathology Botucatu Medical School São Paulo State University (UNESP), Rubião Junior, s/n, 18618-970
dc.description.affiliationUnespDepartment of Pathology Botucatu Medical School São Paulo State University (UNESP), Rubião Junior, s/n, 18618-970
dc.identifierhttp://dx.doi.org/10.1016/j.mex.2021.101228
dc.identifier.citationMethodsX, v. 8.
dc.identifier.doi10.1016/j.mex.2021.101228
dc.identifier.issn2215-0161
dc.identifier.scopus2-s2.0-85099395121
dc.identifier.urihttp://hdl.handle.net/11449/207144
dc.language.isoeng
dc.relation.ispartofMethodsX
dc.sourceScopus
dc.subjectColony-forming units counting (CFU)
dc.subjectComputer-assisted
dc.subjectImage processing
dc.subjectMicrobial colony count
dc.subjectProstheses and implants
dc.titleFractal dimension analysis: A new tool for analyzing colony-forming unitsen
dc.typeArtigo
dspace.entity.typePublication
unesp.author.orcid0000-0003-1674-7371[1]
unesp.author.orcid0000-0001-9352-2630[8]
unesp.campusUniversidade Estadual Paulista (UNESP), Faculdade de Medicina, Botucatupt
unesp.departmentPatologia - FMBpt

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