Algebraic approach to optimal clone selection applied in metagenomic projects
MetadataShow full item record
Due to the wide diversity of unknown organisms in the environment, 99% of them cannot be grown in traditional culture medium in laboratories. Therefore, metagenomics projects are proposed to study microbial communities present in the environment, from molecular techniques, especially the sequencing. Thereby, for the coming years it is expected an accumulation of sequences produced by these projects. Thus, the sequences produced by genomics and metagenomics projects present several challenges for the treatment, storing and analysis such as: the search for clones containing genes of interest. This work presents the OCI Metagenomics, which allows defines and manages dynamically the rules of clone selection in metagenomic libraries, thought an algebraic approach based on process algebra. Furthermore, a web interface was developed to allow researchers to easily create and execute their own rules to select clones in genomic sequence database. This software has been tested in metagenomic cosmid library and it was able to select clones containing genes of interest. Copyright 2010 ACM.
How to cite this document
Showing items related by title, author, creator and subject.
A relação entre a álgebra acadêmica e a álgebra escolar em um curso de licenciatura em matemática: concepções de alunos e professores Santos, Daniela Miranda Fernandes (Universidade Estadual Paulista (UNESP), 2016) [Tese de doutorado]A presente pesquisa, vinculada à linha “Processos Formativos, Ensino e Aprendizagem”, foi implusionada pela questão: Qual a relação entre a álgebra acadêmica e a álgebra escolar expressa nas concepções dos licenciandos e ...
Esteves, Livea Cichito (Universidade Estadual Paulista (UNESP), 2020) [Dissertação de mestrado]O principal objetivo deste trabalho é apresentar a teoria de Galois sobre anéis comutativos, exibindo uma deﬁnição adequada para uma extensão de anéis ser galoisiana, de modo que esta seja uma generalização natural da ...
Cavalcanti, R. T.; da Rocha, R.; Hoff da Silva, J. M. (Advances in Applied Clifford Algebras, 2017) [Artigo]It is shown that the meson algebra can be faced as the tensor product of Clifford algebras and, then, by constructing the DKP field by means of Elko spinors, we demonstrate that the symmetries of the so called very special ...